The performances of PoPMuSiC in predicting the changes in folding free energy resulting from single-site mutations were evaluated using a 5-fold cross validation procedure [29]. In a first step, the values of the parameters of the αi(A) functions (eq. (3)) were identified so as to minimize the root mean square error … See more In addition to its high level of performances, and in particular its good specificity to stabilizing mutations, the ability of the PoPMuSiC-2.1 server to rapidly … See more To illustrate the relevance and usefulness of the sequence optimality scores Γ computed by PoPMuSiC-2.1, we investigated the relationship between the … See more WebJun 15, 2024 · Figure 2 Sequence optimality in the active site of the PRAI-IGPS enzyme. A. Sample output of the PoPMuSiC-2.1 web server, corresponding to residues 41-120 of the …
PoPMuSiC 2.1: A web server for the estimation of protein stability
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WebJul 5, 2024 · Here, we report performance of eight protein stability calculators (PoPMuSiC 3.1, I-Mutant 2.0, I-Mutant 3.0, CUPSAT, FoldX, mCSM, BeatMusic and ENCoM) against 54 … WebMuSiC is a suite of programs that evaluate the biophysical effects of amino acid mutations in proteins. They request the experimental or modeled 3-dimensional protein structure as … WebJan 1, 2015 · PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality. BMC Bioinformatics, 12 (2011), p. 151. View in … diamond lady riverboat sunk